Solution : https://service.sap.com/sap/support/notes/89974 (SAP Service marketplace login required)
Key words : 
directory /usr/sap/<sysid>/sys/exe/run, 3a additional key words r3up password, setup /usr/sap/put/buffer/testig, refresh object listor follow oss note #28683, installation viii/ r3up key word attention, apply sap standard hot packages release 3, /    important general information ii/  supplementary information, viii/ r3up key word            password, directory /usr/sap/put/bin, sapserv3 ~ftp/specific/issw/rel_13a
Related Notes : 
       
| 96525 | IS-SW Rel 1.3 and R/3 3.1H Hot Packages | 
| 85630 | |
| 80078 | IS-SW Rel 1.2 and R/3 3.0F Hot Packages | 
| 63841 | Release Information of R/3 Add-On IS-SW & IS-HT | 
| 53902 | Conflicts between Support Packages and add-ons |